Retina Python Packages

retinal-thin-vessels

A Python package for computing the recall and precision scores specifically on thin vessels in retinal images and generating weight masks for BCE Loss to enhance models perfomance on segmenting these fine structures, as detailed in the paper "Vessel-Width-Based Metrics and Weight Masks for Retinal Blood Vessel Segmentation".

retinawhitenoise

Recreate white-noise stimuli

aerzip

Useful tools to compress and decompress AEDAT files in Python

openretina

Open source retina model architectures and training setups

heyexreader

Python package for reading and parsing Heyex Heidelberg Spectralis OCT files

mlscorecheck

Testing the consistency of binary classification performance scores reported in papers

stnmf

A fast and versatile implementation of spike-triggered non-negative matrix factorization (STNMF) based on accelerated/fast HALS algorithms