Research Tools Python Packages

web-forager

A search-and-fetch toolkit for AI agents, available as an MCP server and as standalone Agent Skills

duckduckgo-mcp

A search-and-fetch toolkit for AI agents, available as an MCP server and as standalone Agent Skills

citevahti

Run unit tests on your manuscript. Check every manuscript claim against its cited evidence. Human-first, AI-second, Zotero-audited, local-first.

figrecipe

Reproducible matplotlib wrapper with mm-precision layouts

paperbanana

Open source implementation and extension of Google Research’s PaperBanana for automated academic figures, diagrams, and research visuals, expanded to new domains like slide generation.

qsvt-pennylane

Python toolkit for Quantum Singular Value Transformation (QSVT), including polynomial constructions, matrix function workflows, and reproducible tools for research in quantum algorithms and numerical linear algebra.

falsiflow

Stop unverifiable AI eval, product metric, and R&D claims from passing CI.

qml-pennylane

Modular Python framework for quantum machine learning using PennyLane, including variational classifiers, quantum kernels, and reproducible workflows for hybrid quantum–classical experiments.

bibexpy

BibexPy is a Python-based software designed to streamline bibliometric data integration, deduplication, metadata enrichment, and format conversion. It simplifies the preparation of high-quality datasets for advanced analyses by automating traditionally manual and error-prone tasks.

data-reliability-index

Data Reliability Index is a Python package for attaching trust metadata to data, scoring reliability, and filtering records through explicit policies before they are used in analysis, APIs, or pipelines.

rrdoctor

Artifact Evaluation readiness checker for research code: static scan, safe fixes, verify ladder, appendix, and agent-ready gates. Local-first, no API key.

npyquick

A quick GUI tool to preview 2D npy images and cross-section analysis.

psyexp-core

Task-agnostic harness for PsychoPy experiments — screen & frame-timing setup, run manifests, CSV recording, setup wizard, instruction pager, and keyboard abstraction.

cli-anything-zotero

CLI server for Zotero 7/8/9 — let AI manage your library. 70+ CLI commands for search, import, PDF, BibTeX, notes, and more. Works with Claude, Cursor, ChatGPT.

vqe-pennylane

Python toolkit for Variational Quantum Eigensolver (VQE), QPE, and QITE workflows for quantum chemistry simulations using PennyLane, supporting reproducible hybrid quantum–classical experiments, using PennyLane.

rekos

Terminal-native passive OSINT CLI for local-first public-source investigation workspaces

waybacktweets

Retrieves archived tweets CDX data from the Wayback Machine, performs necessary parsing, and saves the data.

reminder-detector

Implementation of the packing detection heuristic from the paper "Packed PE File Detection for Malware Forensics" of Han et al.

bintropy

Analysis tool for estimating the likelihood that a binary contains compressed or encrypted bytes

paper-verify

Standalone citation fact-checking tool for markdown/docs — extract, fetch, judge, score, report.

peid

Python implementation of the Packed Executable iDentifier (PEiD)

gharc

A stream-processing tool for downloading and filtering terabytes of GitHub Archive data on consumer hardware. Outputs to Parquet/JSONL with low storage overhead.

pypackerdetect

Packing detection tool for PE files

overleaf-mcp-server

Edit your Overleaf projects from Claude. Local, auditable, single-user by design. stdio for Claude Desktop, HTTP for claude.ai web.