PyRank

Reproducible Research Python Packages

Python packages with the GitHub topic reproducible-research. Sorted by monthly downloads, with stars and forks.
cthoyt
pystow

👜 Easily pick a place to store data for your Python code.

615K 43 6
NeurodataWithoutBorders
pynwb

A Python API for working with Neurodata stored in the NWB Format

146K 225 98
InsightSoftwareConsortium
itk-core

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

111K 2K 750
InsightSoftwareConsortium
itk

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

111K 2K 750
InsightSoftwareConsortium
itk-numerics

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

110K 2K 750
InsightSoftwareConsortium
itk-filtering

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

110K 2K 750
InsightSoftwareConsortium
itk-io

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

106K 2K 750
InsightSoftwareConsortium
itk-segmentation

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

105K 2K 750
InsightSoftwareConsortium
itk-registration

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

101K 2K 750
scitex-ai
scitex-dev

Dev tooling, linters & ecosystem auditor for SciTeX packages

43K 0 0
scitex-ai
scitex-scholar

Scientific paper search, enrichment, download, and management

36K 6 1
ywatanabe1989
figrecipe

Reproducible matplotlib wrapper with mm-precision layouts

36K 1 2
ywatanabe1989
scitex-logging

Structured logging utilities for scientific workflows

35K 0 0
scitex-ai
scitex-io

Universal scientific data I/O with a plugin format registry

35K 0 4
ywatanabe1989
scitex-config

Configuration management with priority cascade: direct → yaml → env

35K 0 0
ywatanabe1989
newb

A fresh AI agent tries to use your package — if it succeeds, your docs work

34K 0 0
ywatanabe1989
scitex-app

Archived predecessor of scitex-sdk. App code is maintained in scitex_sdk.app.

34K 0 0
ywatanabe1989
scitex-ssh

SSH primitives (exec/copy/attach/tunnel) with per-host allowlist

34K 1 0
ywatanabe1989
scitex-context

Execution-context detection (script vs Jupyter vs IPython) + stream suppression

33K 0 0
ywatanabe1989
scitex-browser

Browser automation for scholarly research paper access

33K 0 0
ywatanabe1989
scitex-str

Text processing for scientific workflows (LaTeX, colors, parsing)

33K 0 0
ywatanabe1989
scitex-session

@session decorator + lifecycle (auto-CLI, output tree, random-state mgmt)

33K 0 0
ywatanabe1989
scitex-repro

Reproducibility utilities (random state, timestamps, hashing)

33K 0 0
ywatanabe1989
scitex-dict

Dictionary utilities (DotDict, safe_merge)

33K 0 0