Quantification Python Packages

diplib

Quantitative Image Analysis in C++, MATLAB and Python

directlfq

Fast and accurate label-free quantification for small and very large numbers of proteomes

mlquantify

A Python Quantification Library

small-fish-gui

Software for smFISH quantification with graphical interface, thought to be easy to install and use.

quapy

A framework for Quantification written in Python

nucdetect

Python interface to detect and quantify intranuclear proteins

hplc-peakpicker

HPLC chromatogram peak detection, baseline correction, deconvolution and calibration-curve quantification for Agilent ChemStation data — pip install hplc-peakpicker

isoquant

A universal toolkit for upstream processing of long RNA reads

cn-stats

获取中国国家统计局网站数据。

alphaquant

An open-source Python package for accurate and sensitive peptide and protein quantification.

myoquant

MyoQuant🔬: a tool to automatically quantify pathological features in muscle fiber histology images. Demo version deployed at: https://huggingface.co/spaces/corentinm7/MyoQuant

evatool

Extracellular Vesicles Abundance of ncRNAs expression quantification tool

pyamares

pyAMARES, an Open-Source Python Library for Fitting Magnetic Resonance Spectroscopy Data

ngauge

A Python library which provides a collection of tools for the measurement, quantification, and visualization of neuron morphology.

axoden

Open-source tool for unbiased quantification of labeled axonal projections from microscopy images. Fluorophore- and species-agnostic, using Otsu thresholding. Available as a web app, standalone GUI, and Python package.

heliq

Quantification of helical morphologies

calibrate

Create and use linear- and power-regression based calibration curves

knrscore

KNRScore is a Python package for computing K-Nearest-Rank Similarity, a metric that quantifies local structural similarity between two maps or embeddings.

quantificationlib

QuantificationLib is an open-source library for quantification learning.

ibaqpy

Absolute quantification package based on quantms.io

pycroquet

python Crispr Read to Oligo QUantification and Evaluation Tool

economic-data-tools

经济数据工具