Python Bindings Packages

pyhmmer

Cython bindings and Python interface to HMMER3.

imgui

Cython-based Python bindings for dear imgui

fastobo

Faultless AST for Open Biomedical Ontologies in Python.

pyfamsa

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.

python-lzo

Python bindings for the LZO data compression library

cbapi

Carbon Black API - Python language bindings

comby

Python bindings for Comby

uv-ffi

Persistent in-process execution engine for uv — internal dependency of omnipkg

rrdtool

Python bindings for rrdtool

tempo-api-python-client

Python bindings for Tempo - https://apidocs.tempo.io/

pyside6-scintilla

PySide6 bindings for Scintilla

dartpy

Research-focused C++23 physics engine for robotics, animation, and machine learning, with Python bindings

rhwp-python

PyO3 Python bindings for rhwp — parser and renderer for HWP/HWPX documents (Korean Hancom word processor format)

pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

geant4-pybind

Alternative Python bindings for Geant4

semiflow-pde

Fast no_std Rust library for evolution equations and PDEs via Chernoff approximation of operator semigroups — heat, Schrödinger, diffusion, graph & manifold operators. Bindings for C, Python, and WebAssembly.

pybertini

Bertini 2: The redevelopment of Bertini in C++ and Python.

pyfasttext

Yet another Python binding for fastText

fast-h2m

a fork of html-to-markdown with speed enhancements

sqlitegraph

Embedded graph database on SQLite — HNSW vector search, Cypher-like queries, graph algorithms (BFS, A*, SCC, dominance), ACID + WAL + MVCC delta log, Python bindings, Native V3 CSR backend.

pypublicdecompwt

Python bindings for EUMETSAT's PublicDecompWT

sfst-transduce

Python bindings for SFST focusing on transducer usage

plip

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361

bertini2

Bertini 2: The redevelopment of Bertini in C++ and Python.