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Pseudobulk Python Packages

Python packages with the GitHub topic pseudobulk. Sorted by monthly downloads, with stars and forks.
noamteyssier
adpbulk

pseudobulking on an AnnData object

3K 37 1
s4s4s4s
pbcheck

An auditor of pseudoreplication in single-cell RNA-seq differential expression. Phase 0: pre-registered measurement study.

125 0 0
ethanfenton
scagg

Pseudobulk and metacell aggregation for single-cell RNA-seq (AnnData/scanpy + Seurat/R)

86 0 0
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology