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Protein Sequence Python Packages

Python packages with the GitHub topic protein-sequence. Sorted by monthly downloads, with stars and forks.
MartinThoma
propy3

A Python 3 version of the protein descriptor package propy

2K 49 12
aziele
fastapy

A lightweight Python module to read and write FASTA sequence records

1K 11 2
aziele
pairwise-sequence-alignment

A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water

142 17 3
isyslab-hust
protflash

ProtFlash: A lightweight protein language model

130 96 3
jaumebonet
rstoolbox

Python Toolbox For Rosetta Silent Files Processing

124 10 9
kn-bibs
dotplot

Simple visualisation tool for sequences' similarity in bioinformatics

95 13 2
dohlee
pifold-pytorch

An unofficial re-implementation of PiFold, a fast inverse-folding algorithm for protein sequence design, in PyTorch.

54 5 2
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
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