Protein Function Prediction Python Packages

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

mdeepfri

Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.

annopro

Feature map and function annotation of Proteins

proteinfp

End-to-end protein function prediction from structure alone: active sites, binding pockets, GO terms, PPI partners, and drug candidates.

profab-pypi

A platfrom supplies various machine learning algorithms and datasets and evaluation metrics for Protein Function Prediction