Protein Function Prediction Python Packages

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

mdeepfri

Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.

proteinfp

End-to-end protein function prediction from structure alone: active sites, binding pockets, GO terms, PPI partners, and drug candidates.

annopro

A simple python package for annotating protein sequences

profab-pypi

A platfrom supplies various machine learning algorithms and datasets and evaluation metrics for Protein Function Prediction