protein-engineering
Analysing Sequence Activity Relationships (SARs) of protein sequences :microscope: and their mutants using Machine Learning. :computer:
JAX/Equinox implementation of ProteinMPNN and LigandMPNN for protein sequence design
A graph-based python framework for fitness landscape analysis
A forge for protein workflows. One Python script, every tool in your stack.
PyPEF – Pythonic Protein Engineering Framework
QC and tag-site scoring for designed protein binders from predicted complexes.
Phage library sequence generator with degenerate basepairs.
Precomputed FoldX binding ddG for SKEMPI 2.0 mutations, with the campaign pipeline that produced them
