Precision Medicine Python Packages

pytdc

Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

gene-normalizer

Services and guidelines for normalizing genes

disease-normalizer

Services and guidelines for normalizing disease terms

thera-py

Services and guidelines for normalizing drug and other therapy terms

sctape

deep learning tools for bulk RNA-seq deconvolution and gene expression analysis

pasmopy

Patient-Specific Modeling in Python

mitywgs

mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

txagent

TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

txgnn

TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

meganorm

A Python package for normative modeling on large-scale EEG and MEG data.

precisiondoc

Medical Precision Document Processing Tool

pgx-mcp

MCP server for pharmacogenomics — ClinVar, PharmGKB, gnomAD, OpenTargets, and clinical trials from Claude