Precision Medicine Python Packages

pytdc

Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

gene-normalizer

Services and guidelines for normalizing genes

disease-normalizer

Services and guidelines for normalizing disease terms

thera-py

Services and guidelines for normalizing drug and other therapy terms

meganorm

MEGaNorm is a Python package for normative modeling on MEG and EEG data.

pasmopy

Patient-Specific Modeling in Python

sctape

Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)

pgx-mcp

MCP server for pharmacogenomics — ClinVar, PharmGKB, gnomAD, OpenTargets, and clinical trials from Claude

phenoverse

Deep interpretable learning of sample representations for characterizing disease states in single-cell transcriptomics

mitywgs

mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

precisiondoc

Medical Precision Document Processing Tool

txagent

TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

txgnn

TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

snp-genomic-report

Turn raw consumer DNA data (FTDNA, AncestryDNA, 23andMe, MyHeritage) into a research/educational genomic PDF report — 413 annotated SNPs across 33 domains. Not medical advice.