Pkpd Python Packages

pairsort

pairsort: rank anything with AI judges — many small pairwise questions, coupled into one calibrated ranking (PKPD / Bradley–Terry) on Jev-style judges

openpkflow

Python-first toolkit for dissolution similarity, NCA, PK/PD simulation, and pharmacometric reporting

chi-drm

Chi is an open source Python package which is designed for PKPD modelling and model-informed precision dosing (MIPD).

cellsim

Physics-first, uncertainty-honest in-silico cell and drug-response simulator (Python). Validated docking/ADMET input layer (Vina, OpenFF, xTB), cell-level PK/PD modules, and a cell/colony engine under construction toward a validated interactive dish.

simbiology-mcp

An MCP server providing AI assistants with access to MATLAB SimBiology for modelling, simulating, and analyzing biological systems

pharmode

A Python library for automated PK/PD ODE model identification from concentration–time data. Selects the compartmental structure, estimates parameters, and flags identifiability problems; no model specification or starting values required.

pysb-pkpd

PySB add-on providing domain-specific macros and models for empirical and mechanistic PK/PD modeling.