Physiology Python Packages

neurokit2

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

131K 2K 552

pyabf

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

12K 114 38

phys2cvr

python module to compute cerebrovascular reactivity mapping and other related maps

5K 6 24

gpbiometricspy

Scientific Python infrastructure for Gazepoint EDA/SCR, PPG/HRV, pupil, gaze, AOI, QC and multimodal psychophysiology.

2K 0 0

phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

777 66 49

pysio-hermes

Heterogeneous Edge Realtime Measurement and Execution System: A Unified Open-Source Framework for Realtime Multimodal Physiological Sensing, Edge AI, and Intervention in Closed-Loop Smart Healthcare Applications

594 17 5

peakdet

Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

555 28 22

openhdemg

A powerful toolbox for the analysis of HDsEMG recordings

478 67 14

heartandsole

Python library for analysis of running data files

446 13 3

phyaat

PhyAAt: Physiology of Auditory Attention - Processing Library

349 9 6

physioblocks

Simulation of dynamical models of physiological systems

313 5 2

pysio-hermes-pupillabs

Pupil Labs Core smartglasses support module for HERMES

306 0 0

axographio

A Python package for reading and writing AxoGraph data files

284 3 2

physioqc

Toolbox for physiological data (Automagic) Quality Control

277 3 8

pymuscle

A motor unit based model of skeletal muscle and fatigue

234 70 8

pysio-hermes-mvn

Xsens MVN Analyze support module for HERMES

219 0 0

somnio

Python library and CLI for sleep and physiological data workflows.

210 1 0

neurokit2cw

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

197 2K 552

pysiology

A Python package for physyological's signals processing

183 72 7

neurokit

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

178 392 103

pysio-hermes-tmsi

TMSi SAGA support module for HERMES

171 0 0

physutils

Common tools for the physiopy suite

160 1 4

phys2denoise

A toolbox and collection of scripts to prepare physiology data for fMRI denoise

148 10 20

pysio-hermes-basler

Basler GigE camera support module for HERMES

144 0 0