Physiology Python Packages

neurokit2

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

pyabf

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

phys2cvr

python module to compute cerebrovascular reactivity mapping and other related maps

phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

pysio-hermes-pupillabs

A Pupil Labs smartglasses support module for HERMES

pysio-hermes

A realtime physiological sensing and edge AI processing framework

heartandsole

Python library for analysis of running data files

axographio

A Python package for reading and writing AxoGraph data files

phyaat

PhyAAt: Physiology of Auditory Attention - Processing Library

pysio-hermes-mvn

An Xsens MVN Analyze support module for HERMES

peakdet

Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

physioblocks

Simulation of dynamical models of physiological systems

neurokit

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

pymuscle

A motor unit based model of skeletal muscle and fatigue

pysiology

Physiological signal processing in Python

openhdemg

Open-source analysis of High-Density EMG data

neurokit2cw

The Python Toolbox for Neurophysiological Signal Processing. Versão editada CardioWEB

physioqc

Toolbox for physiological data (Automagic) Quality Control

pysio-hermes-torch

PyTorch AI processing support module for HERMES

physutils

Set of utilities meant to be used with Physiopy libraries

pysio-hermes-dots

Movella DOTs IMUs support module for HERMES

phys2denoise

A toolbox and collection of scripts to prepare physiology data for fMRI denoise

pysio-pyemg-cometa

Pythonic wrapper library for Cometa sEMG Waveplus devices

pysio-hermes-cometa

A Cometa sEMG support module for HERMES