Pharmacogenomics Python Packages

pypgx

A Python package for pharmacogenomics (PGx) research

cyrius

A tool to genotype CYP2D6 with WGS data

pgx-mcp

MCP server for pharmacogenomics — ClinVar, PharmGKB, gnomAD, OpenTargets, and clinical trials from Claude

paccmann-predictor

PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction prediction

snp-genomic-report

Turn raw consumer DNA data (FTDNA, AncestryDNA, 23andMe, MyHeritage) into a research/educational genomic PDF report — 413 annotated SNPs across 33 domains. Not medical advice.