Peptide Python Packages

biobase

A home for all biological/bioinformatics constants from protein strings to BLOSUM matrices.

labmate-mcp

Your AI lab companion — 78 MCP tools for literature, compounds, synthesis, benchwork, peptides & publication writing

protgraph

ProtGraph - A Graph-Generator for Proteins

genotopep

Reproducible peptide candidate generation from assemblies and predicted proteins

peplink

Peptide <-> SMILES utilities for monomer peptides with non-canonical residues, terminal modifications, and selected cyclizations.

pepid

Highly customizable research-oriented peptide search engine

peptide-calculations

Reusable research-use-only peptide calculation and volume visualization tools