Peptide Sequences Python Packages

synth-pdb

Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development. Jupyter Notebook tutorials are available to visualize the concepts..

peptacular

A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic patterns, and more.

dlomix

Python framework for Deep Learning in Proteomics

protpeptigram

Mapping peptides to source protein for immunopeptidiomics data analysis

helixvis

Create 2-dimensional visualizations of alpha-helical peptide sequences