Pbs Python Packages

adaptive-scheduler

Run many functions (adaptively) on many cores (>10k-100k) using mpi4py.futures, ipyparallel, loky, or dask-mpi. :tada:

dpdispatcher

generate HPC scheduler systems jobs input scripts and submit these scripts to HPC systems and poke until they finish

pystand

Command line tool to install pre-built Python versions from the python-build-standalone project

loon

:package: A Python tookit for operating remote host based on SSH

experi

An interface for managing computational experiments with many independent variables.

gravityspawner

A spawner for JupyterHub to let user adjust resources

batch4py

Programmatic interface to batch schedulers.

tq1

Simple Command Line Job Manager

datasnakes

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

orthoevol

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

pbs-generator

A PBS script generator

qiime-tools

Tools for phylogenetic data analysis including visualization and cluster-computing support.

qtop

qtop: the fast text mode way to monitor your cluster's utilization and status; the time has come to take back control of your cluster's scheduling business

pyqueue

A python library for generating PBS scripts and submitting them to queue

phylotoast

Tools for phylogenetic data analysis including visualization and cluster-computing support.

ppbs

Python-based Portable Batch System (PBS) job submission