PyRank

Pathways Python Packages

Python packages with the GitHub topic pathways. Sorted by relevance, with stars and monthly downloads.
DBRetina
dbretina

DBRetina Python Package

2K 1 3
bio2bel
bio2bel-wikipathways

Integration of pathway-related information from WikiPathways in BEL

1K 3 1
bio2bel
bio2bel-kegg

A Bio2BEL package for integrating pathway-related information from KEGG in BEL

1K 13 3
bio2bel
bio2bel-reactome

Integration of pathway-related information from Reactome in BEL

830 5 1
compath
compath-resources

ComPath Resource Utilities

362 9 1
PathwayMerger
pathme

Harmonizing pathway databases using Biological Expression Language (BEL)

302 20 2
ComPath
compath

A web application for exploring and comparing the overlaps across pathway resources

281 13 0
PathwayMerger
pathme-viewer

A plugin for PathMe that allows to explore overlaps across pathway databases

187 6 2
bio2bel
bio2bel-go

A package for converting GO to BEL

178 1 0
dustine32
gocamgen

Python library for constructing GO-CAM model RDF

164 0 0
hemekg
hemekg

Mechanistic knowledge about heme and hemolytic disorders in Biological Expression Language with PyBEL

93 3 3