PyRank

Pathways Python Packages

Python packages with the GitHub topic pathways. Sorted by relevance, with stars and monthly downloads.
DBRetina
dbretina

DBRetina Python Package

4K 1 3
bio2bel
bio2bel-wikipathways

A package for converting Wikipathways to BEL

1K 3 1
bio2bel
bio2bel-kegg

A package for converting KEGG gene sets into BEL

1K 13 3
bio2bel
bio2bel-reactome

A wrapper around Reactome RESTful API

948 5 1
compath
compath-resources

This repository contains the different resources derived or generated using ComPath

522 9 1
ComPath
compath

A web application for exploring and comparing the overlaps across pathway resources

300 13 0
PathwayMerger
pathme

Harmonizing pathway databases using Biological Expression Language (BEL)

278 20 2
bio2bel
bio2bel-go

A Bio2BEL package for converting the Gene Ontology (GO) to BEL

146 1 0
PathwayMerger
pathme-viewer

A web application for visualizing and exploring pathway knowledge in Biological Expression Language (BEL)

134 6 2
dustine32
gocamgen

Base repo for constructing GO-CAM model RDF

114 0 0
hemekg
hemekg

Modeling heme pathogenicity and pathway dysregulation in the context of hemolytic disorders

82 3 3