pairs
1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
An easy-to-use Hi-C data processing software supporting distributed computation.
A library for bijectively mapping all ordered pairs from two finite sets A and B into a single linear index. KombiN orders pairs by ascending weight (sum of indices) using a three-region zig-zag algorithm, enabling O(1) bidirectional lookups.
