pacbio
Sequana: a set of Snakemake NGS pipelines
Structural variation caller using third generation sequencing
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
Placeholder for biolic, a fast streaming bioinformatics toolkit. Python bindings are planned; the tool currently ships as a Rust CLI.
swan is a tool for visualizing and analyzing transcript isoforms
Quality control plotting for long reads
Predict plasmids from uncorrected long read data
Retro-ingineering of PacBio's modelling of IPD (RSII, Sequel I, Sequel II v2)
preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.
