oxford-nanopore
Bin Oxford Nanopore reads by cumulative sequencing time intervals. Guppy, MinKNOW and Dorado compatible. Fast, streaming, zero dependencies.
High-performance dual barcode and primer demultiplexer for MinION sequenced reads, optimized for fungal DNA barcoding.
Long read based human genomic structural variation detection with cuteSV
CLI tool for flexible and fast adaptive sampling on ONT sequencers
De novo construction of isoforms from long-read data
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
Wrapper to read fast5, slow5, blow5 and pod5 files.
Wrapper to read fast5 and pod5 files.
De novo clustering of long transcript reads into genes
PEPPER-Margin-DeepVariant
A Python library to visualize and analyze long-read transcriptomes
Quality control plotting for long reads
Predict plasmids from uncorrected long read data
preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.
