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Orthology Assignments Python Packages

Python packages with the GitHub topic orthology-assignments. Sorted by monthly downloads, with stars and forks.
fethalen
phylopypruner

Tree-based orthology inference with functionality for reducing contamination

1K 10 1
JLSteenwyk
orthofisher

a broadly applicable tool for automated gene identification and retrieval

426 42 1
jlsteenwyk
orthosnap

a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees

356 32 1
univieCUBE
deepnog

Protein orthologous group assignment with deep learning

245 30 8
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
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