PyRank

Omop Python Packages

Python packages with the GitHub topic omop. Sorted by relevance, with stars and monthly downloads.
RADar-AZDelta
rabbit-in-a-blender

An ETL pipeline to transform your EMP data to OMOP.

2K 18 6
aphp
eds-scikit

eds-scikit is a Python library providing tools to process and analyse OMOP data

515 45 6
DZD-eV-Diabetes-Research
dzdomop

A Python ORM/data classes representation of the OMOP Common Data Model in different flavors powered by sqlacodegen

381 3 1
thehyve
kotobuki

Update Usagi mappings with kotobuki

359 3 0
edencehealth
sqlalchemy-omopcdm

OMOP CDM v5.4 SQLAlchemy Declarative Mapping Models

159 1 0
callahantiff
omop2obo

OMOP2OBO is the first health system-wide, disease-agnostic mappings between standardized clinical terminologies in the Observational Medical Outcomes Partnership (OMOP) common data model and several Open Biomedical Ontologies (OBO).

100 97 12