PyRank

Ome Python Packages

Python packages with the GitHub topic ome. Sorted by monthly downloads, with stars and forks.
ome
ome-zarr

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

217K 261 81
ome-zarr-models
ome-zarr-models

A minimal Python package for reading, writing and validating OME-Zarr (meta)data

83K 39 19
imaging-formats
bffile

Modern Bio-Formats wrapper with clean lazy Python API

3K 24 5
Euro-BioImaging
eubi-bridge

A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processing and multi-dimensional concatenation.

1K 32 1
tlambert03
bioformats-jar

(deprecated) meta-package to import bioformats_jar from scyjava

1K 0 0
ome
omego

OME, Go! Installation and administration tool for OME applications.

1K 6 16
vibbits
nis2pyr

Python utility and library for converting Nikon .nd2 files to pyramidal OME TIFF.

161 13 1
manics
jupyter-omero-authenticator

Use OMERO to authenticate with JupyterHub

83 0 0