Ome Python Packages

ome-zarr

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

426K 239 68

ome-zarr-models

A minimal Python package for reading, writing and validating OME-Zarr (meta)data

20K 38 17

bioformats-jar

(deprecated) meta-package to import bioformats_jar from scyjava

3K 0 0

bffile

Modern Bio-Formats wrapper with clean lazy Python API

3K 20 4

omego

OME, Go! Installation and administration tool for OME applications.

2K 6 16

eubi-bridge

A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processing and multi-dimensional concatenation.

1K 27 1

nis2pyr

Utility for converting Nikon ND2 files to tiled pyramidal OME TIFF files.

236 12 1

jupyter-omero-authenticator

Use OMERO to authenticate with JupyterHub

113 0 0