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Ome Ngff Python Packages

Python packages with the GitHub topic ome-ngff. Sorted by monthly downloads, with stars and forks.
BioVisionCenter
ngio

ngio is a Python library to streamline OME-Zarr image analysis workflows.

7K 53 11
JaneliaSciComp
fileglancer

Browse, share, and publish OME-Zarr data

6K 30 5
BioVisionCenter
ome-zarr-converters-tools

Tooling to build ome-zarr plate converters

908 6 5
fractal-analytics-platform
fractal-converters-tools

Tooling to build ome-zarr plate converters

379 6 5
ome
ome2024-ngff-challenge

Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data

262 21 20
CraigMyles
raw2features

OME-Zarr whole-slide images to patch- and slide-level foundation-model embeddings - cloud-native, FAIR, model- and backend-agnostic.

152 4 2
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology