PyRank

Oligonucleotide Python Packages

Python packages with the GitHub topic oligonucleotide. Sorted by relevance, with stars and monthly downloads.
ggirelli
ifpd

iFISH Probe Design: a Python3 package to build iFISH probes.

452 12 6
ggirelli
oligo-melting

Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) ion correction, formamide (or general denaturant) correction, and melting curve estimation.

233 12 4
iOLIGO
annokit

Reference genome annotation file processing toolset

185 0 0
ggirelli
fish-prode

A FISH probe design web interface.

163 12 6
scbirlab
ogilo-array

⛓️ Automating construction of oligo library sequences for oligo array synthesis.

129 0 0
iOLIGO
seqbox

seq process tools box

127 0 0
ggirelli
ifpd2

ifpd2: a Python3.7+ package to build iFISH probes

116 3 1
Paradoxdruid
fealden

Tool for generating optimized nucleic acid biosensor sequences

84 2 0
ggirelli
kman

K-Mer management tools

40 0 0