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Ohdsi Python Packages

Python packages with the GitHub topic ohdsi. Sorted by relevance, with stars and monthly downloads.
dermatologist
pyomop

Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.

12K 63 11
RADar-AZDelta
rabbit-in-a-blender

An ETL pipeline to transform your EMP data to OMOP.

4K 16 6
omopHub
omophub

Python SDK for OMOP/OHDSI vocabularies - query 10M+ medical concepts across SNOMED, ICD-10, RxNorm, LOINC & 90+ terminologies via simple API

3K 4 2
DZD-eV-Diabetes-Research
dzdomop

A Python data class representation of the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM)

314 3 1
thehyve
kotobuki

Update Usagi mappings with kotobuki

219 3 0
edencehealth
sqlalchemy-omopcdm

OMOP CDM v5.4 SQLAlchemy Declarative Mapping Models

153 1 0
dermatologist
iflow-mcp-dermatologist-pyomop

OMOP CDM utils in Python

114 63 11
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