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Ngs Pipeline Python Packages

Python packages with the GitHub topic ngs-pipeline. Sorted by relevance, with stars and monthly downloads.
ncbi
pm4ngs

Project Manager for NGS data analysis

585 31 10
solida-core
solida

SOLIDA is command-line solution that facilitate the reproducibility and portability of NGS pipelines. It can easily organize the deployment, the data management and the execution of a Snakemake based workflow.

330 6 1
jrhawley
bio-jtools

Various bioinformatics tools in one package

314 0 0
niekwit
pycrispr

A package for CRISPR-Cas9 screen analysis

165 5 1
dmnfarrell
snipgenie

variant calling and phylogenies from microbial WGS data

119 10 0
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