Ngff Python Packages

ome-zarr

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

multiscale-spatial-image

Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.

ome-zarr-models

A minimal Python package for reading, writing and validating OME-Zarr (meta)data

fileglancer

Browse, share, and publish OME-Zarr data

napari-ome-zarr

A napari plugin for zarr backed OME-NGFF images

ome-writers

Unified API for streaming camera frames to either OME-TIFF or OME-Zarr format

eubi-bridge

A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processing and multi-dimensional concatenation.

omero-cli-zarr

Plugin for exporting images in zarr format.

spatial-image-multiscale

Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.