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Needleman Wunsch Python Packages

Python packages with the GitHub topic needleman-wunsch. Sorted by relevance, with stars and monthly downloads.
althonos
pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

7K 10 1
kensho-technologies
sequence-align

Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.

5K 75 3
scastlara
minineedle

Needleman-Wunsch and Smith-Waterman algorithms in python

3K 50 9
lignum-vitae
goombay

Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calculate distance, show alignment, and display the underlying matrices.

384 21 3
aziele
pairwise-sequence-alignment

Global and local pairwise alignments between nucleotide/protein sequences.

183 16 3
Brono25
cacoepy

Tools related to mispronunciation diagnosis detection (MDD) systems.

172 4 0
eniktab
gasal2-py

GASAL2-Py — Python bindings for GASAL2 (CUDA GPU sequence alignment). Search: GASAL2 python, GASAL2-Py.

44 0 0
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