PyRank

Napari Python Packages

Python packages with the GitHub topic napari. Sorted by relevance, with stars and monthly downloads.
napari
npe2

napari plugin engine v2

174K 20 38
napari
napari

napari: a fast, interactive, multi-dimensional image viewer for python

159K 3K 511
napari
napari-plugin-manager

napari plugin manager to provide a graphical user interface for installing napari plugins.

61K 9 12
tlambert03
napari-omero

Browse your OMERO database from within napari.

23K 40 16
scverse
napari-spatialdata

Interactive visualization of spatial omics data

15K 87 24
4DNucleome
partseg

Tool for segmentation in bioimaging

13K 37 10
matplotlib
napari-matplotlib

Linking napari layers with Matplotlib plots

9K 45 24
haesleinhuepf
napari-skimage-regionprops

Feature extraction for labeled objects in images using regionprops from scikit-image

6K 56 13
Kapoorlabs-CAPED
napatrackmater

Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.

5K 18 3
computational-cell-analytics
micro-sam

Segment Anything for Microscopy

3K 697 105
brainglobe
brainreg-segment

Segmentation of anatomical structures in a common coordinate space

3K 36 12
napari
napari-animation

A napari plugin for making animations

3K 96 37
clEsperanto
napari-pyclesperanto-assistant

GPU-accelerated general purpose image processing and image analysis in napari

2K 36 9
hanjinliu
impy-array

Speed up coding/extending image analysis in Python.

2K 37 1
AllenCellModeling
napari-aicsimageio

Multiple file format reading directly into napari using pure Python

2K 38 12
brainglobe
brainglobe-segmentation

Segmentation of anatomical structures in a common coordinate space

2K 36 12
AllenCell
napari-allencell-segmenter

A plugin that enables image segmentation provided by Allen Institute for Cell Science

1K 20 8
brainglobe
cellfinder-napari

Efficient cell detection in large images using cellfinder in napari

870 22 4
brisvag
blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

859 30 10
jhnnsrs
mikro-napari

napari within the mikro environment

835 0 0
BioimageAnalysisCoreWEHI
lls-core

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

786 15 6
stardist
stardist-napari

StarDist plugin for napari

742 40 10
Mouseland
cellpose-napari

napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

695 65 27
pkosurilab
bellavista

Python package for interactive visualization of imaging-based spatial transcriptomics

662 7 2