PyRank

Napari Python Packages

Python packages with the GitHub topic napari. Sorted by relevance, with stars and monthly downloads.
napari
napari

napari: a fast, interactive, multi-dimensional image viewer for python

145K 3K 496
napari
npe2

napari plugin engine v2

142K 19 36
napari
napari-plugin-manager

napari plugin manager to provide a graphical user interface for installing napari plugins.

60K 9 11
scverse
napari-spatialdata

Interactive visualization of spatial omics data

20K 86 24
4DNucleome
partseg

Tool for segmentation in bioimaging

17K 37 10
matplotlib
napari-matplotlib

Linking napari layers with Matplotlib plots

9K 43 23
tlambert03
napari-omero

Browse your OMERO database from within napari.

8K 40 16
Kapoorlabs-CAPED
napatrackmater

Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.

8K 18 3
haesleinhuepf
napari-skimage-regionprops

Feature extraction for labeled objects in images using regionprops from scikit-image

6K 55 13
AllenCellModeling
napari-aicsimageio

Multiple file format reading directly into napari using pure Python

3K 38 12
brainglobe
brainreg-segment

Manual segmentation of 3D brain structures in a common anatomical space

3K 36 12
napari
napari-animation

A napari plugin for making animations

2K 95 33
brainglobe
brainglobe-segmentation

Segmentation of anatomical structures in a common coordinate space

2K 36 12
clEsperanto
napari-pyclesperanto-assistant

GPU-accelerated image processing in napari using OpenCL

2K 36 9
hanjinliu
impy-array

Speed up coding/extending image analysis in Python.

2K 37 1
brisvag
blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

1K 30 10
brainglobe
cellfinder-napari

Efficient cell detection in large images

1K 22 4
pymmcore-plus
napari-micromanager

Micro-Manager GUI interface in napari.

1K 76 25
pkosurilab
bellavista

Python package for interactive visualization of imaging-based spatial transcriptomics

1K 7 2
AllenCell
napari-allencell-segmenter

A plugin that enables image segmentation provided by Allen Institute for Cell Science

1K 20 8
BioimageAnalysisCoreWEHI
lls-core

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

981 14 6
jhnnsrs
mikro-napari

A napari plugin to interact with and provide functionality for a connected arkitekt server

970 0 0
Mouseland
cellpose-napari

a generalist algorithm for anatomical segmentation

843 63 26
lowe-lab-ucl
napari-arboretum

Track and lineage visualization with btrack and Napari :evergreen_tree:

685 45 10