PyRank

Mzml Python Packages

Python packages with the GitHub topic mzml. Sorted by monthly downloads, with stars and forks.
mobiusklein
psims

A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML

84K 26 12
mobiusklein
ms-deisotope

A library for deisotoping and charge state deconvolution of complex mass spectra

4K 43 16
tacular-omics
mzmlpy

Fast, lazy mzML reader for Python: typed models, gzip random access, validation, Numpress/zstd decoding

4K 4 0
mobiusklein
pymzdata

Python bindings for reading mass spectrometry data with mzdata

2K 44 16
tacular-omics
spectrl

Self-contained, URL-safe mass spectrum interchange for Python and TypeScript

2K 1 0
tacular-omics
spxtacular

Chainable Spectrum API for MS processing: denoising, isotope deconvolution, matching, scoring, plotting

2K 4 1
Sigilweaver
openmassspec-io

High-performance Rust + Python readers for mass spectrometry / proteomics raw data.

2K 11 1
tacular-omics
tdfextractor

Extract MS/MS spectra from Bruker timsTOF .d folders and convert them to MS2, MGF, or mzML.

1K 3 0
Sigilweaver
openmassspec

High-performance Rust + Python readers for mass spectrometry / proteomics raw data.

903 11 1
Sigilweaver
openproteo-io

High-performance Rust + Python readers for mass spectrometry / proteomics raw data.

334 11 1
computational-metabolomics
dimspy

Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data

297 22 10
Sigilweaver
openproteo

High-performance Rust + Python readers for mass spectrometry / proteomics raw data.

202 11 1
xxao
msread

Read popular mass spectrometry formats

60 9 2