Multivariate Analysis Python Packages

scikit-bio

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

process-improve

Python toolkit for analysis of industrial process data; multivariate analysis, designed experiments, process monitoring.

pyscarcopula

Python library for modelling complex multivariate dependencies using stochastic copulas

atomai

Deep and Machine Learning for Microscopy

winning

Scalable econometric algorithms (probit, contests, ratings)

detime-toolkit

Unified Python/CLI time-series decomposition library with native acceleration, multivariate workflows, and machine-readable outputs.

fastrace

Scalable econometric algorithms (probit, contests, ratings)

mbpls

(Multiblock) Partial Least Squares Regression for Python

mfte

MFTE (Multi Feature Tagger of English) Python is the Python version based on Le Foll's MFTE written in Perl. It is extended to include semantic tags from Biber (2006) and Biber et al. (1999), including other specific tags.

timecorr

Estimate dynamic high-order correlations in multivariate timeseries data

colormap-complex

Complex / 2d multivariate bivariate colormap / Domain coloring for Matplotlib, Plotly etc. (pure-numpy)

hoggorm

Explorative multivariate statistics in Python

pyspi

Comparative analysis of pairwise interactions in multivariate time series.

pi-oplsda

A high-performance, pythonic implementation of Orthogonal Partial Least Squares Discriminant Analysis (OPLS-DA), tailored for metabolomics and bioinformatics

mvgkde

MultiVariate Gaussian Kernel Density Estimation

scikit-extremes

A specialized Python library for sparse multivariate extreme value analysis, structure learning, and robust spectral measure estimation using extremal graphical models.

sekupy

Detergent for Multivariate Analysis Pipelines of Neuroimaging data in Python