PyRank

Multi Omics Integration Python Packages

Python packages with the GitHub topic multi-omics-integration. Sorted by relevance, with stars and monthly downloads.
NPLinker
nplinker

A python framework for microbial natural products data mining by integrating genomics and metabolomics data

648 28 14
cwieder
pathintegrate

PathIntegrate: multivariate modelling approaches for pathway-based muti-omics integration

339 19 1
ws6tg
bio-smart

SMART is a computational framework for spatial multi-omic integration. SMART leverages a modality-independent modular and stacking framework with spatial coordinates and adjusts the aggregation using triplet relationships.

217 3 0
JiaGengChang
myevae

MyeVAE: a multi-modal variational autoencoder for risk profiling of newly diagnosed multiple myeloma

179 1 0
Lin-Xu-lab
cosmos-linxulab

The software is to implement the COSMOS. Please see the website for details.

158 14 2
Lin-Xu-lab
cosmos-lx

The software is to implement the COSMOS. Please see the website for details.

87 14 2