msa
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
<Open Source> Fast, easy-to-use starter kit for new users of Python and FastAPI
Build protein families from sequence clusters by iterative HMM search over very large databases — streaming, deterministic, pyHMMER-based.
NEFF Calculator and MSA File Converter
Scoring multiple sequence alignments with Python
vMPT — visual MSA Planning Tool. Interactive Bokeh app for hand-picking JWST/NIRSpec MSA shutter configurations on target-field images. Exports an APT-loadable bundle in the eMPT format.
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
ML-ready ZIP-code metadata for the United States — Census ACS demographics, geography, MSA, and engineered features.
Naive alignment for lists of arbitrary objects.
Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics
