Motif Python Packages

kinase-library

The Kinase Library: a Global Atlas of the Human Protein Kinome

rgt

Toolkit to perform regulatory genomics data analysis

biobase

A comprehensive package of biological constants, serving as a foundational resource for biology and bioinformatics, complemented by functions to streamline related tasks.

matrixprofile-ts

A Python library for detecting patterns and anomalies in massive datasets using the Matrix Profile

motiflets

Motiflets - Simple and Accurate Detection of Motifs in Time Series

motevowrapper

Simple Python parser for MotEvo.

beautifulmotifs

Detect and extract beautiful musical motifs from MIDI files with transformers

artem-rna

Aligning RNA TErtiary Motifs (ARTEM) is a tool for superimposing arbitrary RNA spatial structures

leitmotif

Discovering Leitmotifs in Multidimensional Time Series

spymot

A comprehensive protein analysis platform that combines motif detection with 3D structure validation using AlphaFold2 confidence scores. Designed for cancer biology research, drug discovery, and functional genomics.

oligopool

Oligopool Calculator - Automated design and analysis of oligo pool libraries

simple-fast-python

A python implementation of the SiMPle-Fast algorithm for audio motif detection