PyRank

Motif Analysis Python Packages

Python packages with the GitHub topic motif-analysis. Sorted by relevance, with stars and monthly downloads.
ShaokunAn
spatialquery

Efficient tool to query spatial pattern of spatial-modalities data

2K 5 1
sowpatilab
atarva

ATaRVa - Analysis of Tandem Repeat Variation

2K 20 1
CostaLab
rgt

Toolkit to perform regulatory genomics data analysis

1K 113 29
lignum-vitae
biobase

A comprehensive package of biological constants, serving as a foundational resource for biology and bioinformatics, complemented by functions to streamline related tasks.

1K 12 5
GiorgioMB
automotifs

A wrapper for automatic Motif Detection

712 2 1
shao-lab
mamotif

An integrative toolkit for detecting cell type-specific regulators

227 2 0
asigalov61
beautifulmotifs

Detect and extract beautiful musical motifs from MIDI files with transformers

214 1 0
patrickzib
leitmotif

Discovering Leitmotifs in Multidimensional Time Series

186 4 0
ErfanZohrabi
spymot

A comprehensive protein analysis platform that combines motif detection with 3D structure validation using AlphaFold2 confidence scores. Designed for cancer biology research, drug discovery, and functional genomics.

175 3 0
j-andrews7
pytfmpval

Python bindings for the TFM-Pvalue program.

96 9 5