mobile-genetic-elements
MobiOrigin classifies bacterial contigs as plasmid, chromosome, phage, or unclassified using sequence, coding and mobility-marker evidence.
Tool intended to pull out sequences and annotations between insertion sites specified by the user.
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
A reference-free statistical approach to diversity-generating & mobile genetic element discovery
