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Metagenomic Analysis Python Packages

Python packages with the GitHub topic metagenomic-analysis. Sorted by monthly downloads, with stars and forks.
raw-lab
mercat2

MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data

870 13 2
exabiome
gtnet

The Genome Taxonomy Network for assigning microbial taxonomy to DNA sequences

226 0 0
keplerridge
annoreport

A tool to take annotation files from bakta or prokka and produce a human readable report.

210 0 0
katerinakazantseva
strainy

Graph-based assembly phasing

0 102 6
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology