metabolic-reconstruction
memote – the genome-scale metabolic model test suite
Extract, Retrieve and Predict kcat values for a metabolic model
An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al
Python implementation of mgpipe
