Meta Analysis Python Packages

pymare

PyMARE: Python Meta-Analysis & Regression Engine

nimare

Coordinate- and image-based meta-analysis in Python

anoexpress

Anopheles gene expression in insecticide resistance

scienceai-llm

An open-source agentic harness for scientific literature analysis. Coordinates frontier models to extract data, replicate findings, and perform systematic reviews with full provenance tracking.

living-review-updater

Keep a systematic review up to date: rank/flag newly-found studies using your own prior screening decisions. Ranks for human review, never auto-excludes.

deduplicate-it

Simple online deduplication of literature search results using DOI and title

sievesafe

Zero-shot title/abstract screening for systematic reviews that auto-excludes only below a pre-specified threshold

pysumstats

Python package for reading, combining, meta-analyzing, and saving GWAS summary statistics data.

fastslr

FastSLR - Universal deterministic triage for Systematic Literature Reviews

easy-entrez

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

lisc

Literature Scanner: Automated collection & analyses of the scientific literature.

critiplot

Critiplot: A Python Package for Visualizing Risk-of-Bias Data in Systematic Reviews and Meta-Analyses

paperfetcher

Pip-installable Python package to automate handsearching and citation searching for systematic reviews.

pebba

A tool for ORA meta-analysis

gradec

Meta-analytic gradient decoding

prisma-flowchart

Produce PRISMA-2020 compliant flow diagrams