Medical Research Python Packages

pubmed-search-mcp

🔬 Professional MCP server for biomedical literature research — 40 tools, multi-source search (PubMed, Europe PMC, CORE, OpenAlex), full-text access, citation networks, PICO analysis, and more

pycohortflow

Lightweight Cohort Flow Diagrams built on Matplotlib — with an interactive browser-based generator.

clinical-trials-gov

Open-source clinical trial data, tools, and resources. Find recruiting trials across 300+ conditions.

fandango-aria

Client library for interacting with ARIA APIs for data deposition.

fandango-aria-plugin

Client library for interacting with ARIA APIs for data deposition.