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Medical Image Analysis Python Packages

Python packages with the GitHub topic medical-image-analysis. Sorted by relevance, with stars and monthly downloads.
TorchIO-project
torchio

Medical imaging processing for AI applications.

96K 2K 262
mlmed
torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

85K 1K 249
MedMNIST
medmnist

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

46K 1K 207
TissueImageAnalytics
tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

35K 527 107
JoHof
lungmask

Automated lung segmentation in CT

4K 783 164
frankkramer-lab
miscnn

Framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

4K 423 118
uncbiag
unigradicon

uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)

3K 222 25
MEDomicsLab
mediml

Python Open-source package for medical images processing and radiomics features extraction.

1K 8 2
koriavinash1
deepbrainseg

Deep Learning tool for brain tumor segmentation.

1K 194 42
frankkramer-lab
aucmedi

AUCMEDI - a framework for Automated Classification of Medical Images

980 43 16
CBICA
dlicv

A repository that allows users to apply the DLICV method to their brain imaging data.

973 2 0
pykale
pykale

Knowledge-Aware machine LEarning (KALE): accessible machine learning from multiple sources for interdisciplinary research, part of the 🔥PyTorch ecosystem. ⭐ Star to support our work!

890 481 73
ad12
dosma

An AI-powered open-source medical image analysis toolbox

832 74 16
MEDomics-UdeS
medimage-pkg

Python Open-source package for medical images processing and radiomics features extraction.

816 8 2
haranrk
digipathai

Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay

762 75 28
lochungtin
guava-rt

Geometric Upright-supine Anatomical Variation Analysis framework

554 1 0
caumente
auditapp

AUDIT, Analysis & evalUation Dashboard of artIficial inTelligence

499 8 2
medlee-code
radvis

A visualization tool for medical images

313 4 0
RichardObi
medigan

medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis

294 198 23
risc-mi
ts2d

TotalSegmentator 2D: A Tool for Rapid Anatomical Structure Analysis

249 13 2
perslev
mpunet

Multi-Planar UNet for autonomous segmentation of 3D medical images

238 196 45
wdika
atommic

Advanced Toolbox for Multitask Medical Imaging Consistency (ATOMMIC)

212 23 3
wdika
mridc

Data Consistency Toolbox for Magnetic Resonance Imaging

181 41 11
frankkramer-lab
miscnn-tf-2-0

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

179 423 118
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