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Mechanistic Modeling Python Packages

Python packages with the GitHub topic mechanistic-modeling. Sorted by relevance, with stars and monthly downloads.
ulysseherbach
harissa

Simulation and inference of gene regulatory networks based on transcriptional bursting

599 13 1
Borealis-BioModeling
pysb-units

PySB add-on providing utilities to add units to models and perform dimensional analysis.

126 2 0
blakeaw
pysb-pkpd

PySB add-on providing domain-specific macros and models for empirical and mechanistic PK/PD modeling.

125 11 9
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