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Mechanistic Modeling Python Packages

Python packages with the GitHub topic mechanistic-modeling. Sorted by relevance, with stars and monthly downloads.
ulysseherbach
harissa

Simulation and inference of gene regulatory networks based on transcriptional bursting

433 13 1
blakeaw
pysb-pkpd

PySB add-on providing domain-specific macros and models for pharmacological PK/PD modeling.

82 10 7
Borealis-BioModeling
pysb-units

PySB add-on providing utilities to add units to models and perform dimensional analysis.

74 2 0
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