Mathematical Modelling Python Packages

fxpmath

A python library for fractional fixed-point (base 2) arithmetic and binary manipulation with Numpy compatibility.

147K 206 26

laddu-cpu

Amplitude analysis made short and sweet

70K 5 0

omlt

Represent trained machine learning models as Pyomo optimization formulations

19K 343 73

pyoptinterface

Efficient modeling interface for mathematical optimization in Python

16K 310 27

biosimulators-test-suite

Tools for validating that biosimulation tools are consistent with the BioSimulators standards

4K 7 2

infomeasure

Python package for calculating various information measures, including entropy, mutual information, transfer entropy, and more, with support for both discrete and continuous variables.

3K 70 12

laddu-mpi

Amplitude analysis made short and sweet

3K 5 0

memilio-simulation

Modular spatio-temporal models for epidemic and pandemic simulations

3K 68 23

actuarialmath

Python package to solve actuarial life-contingent risks

2K 20 6

flixopt

Progressive flow system optimization in Python - start simple, scale to complex.

2K 20 9

bondgraphtools

A Multi-Physics Systems Modelling Library

2K 38 19

desdeo

An open source fullstack framework for interactive multiobjective optimization and decision-support..

925 44 40

portpy

Opensource Python project for cancer radiation treatment planning [AAPM'23]

851 181 35

geco

Generators for Combinatorial Optimization

792 19 4

neurodiffeq

A library for solving differential equations using neural networks based on PyTorch, used by multiple research groups around the world, including at Harvard IACS.

728 782 104

geometrify

Geometrify is a Python package for easy creation, manipulation, and analysis of 2D geometries, providing comprehensive tools for various operations.

454 2 0

hbmep

Hierarchical Bayesian estimation of MEP recruitment curves

394 6 1

cetsax

CETSA-MS modelling toolkit for dose–response analysis, binder classification, Bayesian inference, ML curve typing, and proteome-wide stability networks.

287 0 0