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Markov State Model Python Packages

Python packages with the GitHub topic markov-state-model. Sorted by relevance, with stars and monthly downloads.
deeptime-ml
deeptime

Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation

10K 873 88
markovmodel
pyemma

🚂 Python API for Emma's Markov Model Algorithms 🚂

2K 338 126
markovmodel
msmtools

Tools for estimating and analyzing Markov state models

859 41 27
Komputerowe-Projektowanie-Lekow
pmarlo

https://pypi.org/project/pmarlo/

332 1 0
bowman-lab
enspara

Tools for ensemble modeling

196 37 16
    • Data from PyPI, GitHub, ClickHouse, and BigQuery