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Macsima Python Packages

Python packages with the GitHub topic macsima. Sorted by monthly downloads, with stars and forks.
mathisbouvet
macsima-qc

Quality control pipeline for MACSima / MACSiQView cell segmentation

184 1 0
mathisbouvet
spatial-cluster-compare

Automated benchmarking and selection of clustering algorithms (KMeans, Agglomerative, Spectral, GMM, DBSCAN) for spatial/multiplex immunofluorescence data, using Hopkins statistic, PCA, multi-metric evaluation (Silhouette, Davies-Bouldin, Calinski-Harabasz, ARI stability) and automatic best-method selection.

141 3 0
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