PyRank

Loop Extrusion Python Packages

Python packages with the GitHub topic loop-extrusion. Sorted by monthly downloads, with stars and forks.
LucasDooms
smc-lammps

LAMMPS code to simulate loop extrusion of DNA by SMC complexes

183 1 0
paulsengroup
stripepy-hic

StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning

169 13 3