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Long Read Python Packages

Python packages with the GitHub topic long-read. Sorted by relevance, with stars and monthly downloads.
kcleal
dysgu

Toolkit for calling structural variants using short or long reads

5K 115 14
Clinical-Genomics
stranger

Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat

2K 41 7
nadjano
polyase

A package for analyzing allele-specific expression in polyploid organisms

265 0 0
mortazavilab
swan-vis

swan is a tool for visualizing and analyzing transcript isoforms

264 69 12
TF-Chan-Lab
lafite

tool for long read transcriptome assembly

251 4 2
zouyinstein
hifisr

No description available

173 10 2
simpsonlab
preqc-lr

preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.

78 3 2
simpsonlab
preqclr

preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.

44 3 2
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