lempel-ziv
Alignment-free graph models of TCR and BCR repertoires built from Lempel-Ziv and FlashBack string decompositions. Compute sequence generation probability (Pgen) and repertoire diversity, and generate new sequences. Python with a C core.
Non-overlapping Lempel–Ziv–Storer–Szymanski Factorization Python Library
PyLFSR
:package: Lempel-Ziv Complexity, fast implementations with :snake: Python (naive, Numba or Cython for speedup), Open-Source (MIT) :+1: →
Compression suite for data frames and tabular data files, csv, excel etc. Using LZHW algorithm.
