Kinetics Python Packages

kineticstoolkit

An Open-Source Python Package to Facilitate Research in Biomechanics

pkynetics

A Python library for thermal analysis and reaction kinetics. Supports DSC, TGA, and dilatometry with tools for model-fitting (JMAK, Kissinger), model-free (Friedman, KAS, OFW) analysis, data processing, and visualization.

kinbot

Automated reaction pathway search for gas-phase molecules

gekim

GeKiM (Generalized Kinetic Modeler) is a framework for creating, simulating, and interpreting arbitrary kinetic schemes. Bespoke models are included for fitting.

geckopy

Toolbox for including enzyme constraints on a genome-scale model.

pyomeca

Python toolbox for biomechanics analysis

pysparks

Software for Polymerization and Reaction Kinetics Simulations

mcp-pykingenie

MCP_PYKINGENIE is a MCP server that provides tools for the analysis of surface-based binding kinetics data.

pyreactlab

Analyze reactions and evaluate thermodynamic feasibility.

nskinetics

NSKinetics: Simulation of Non-Steady state enzyme kinetics including multiple inhibitory phenomena.

drux

Drug Release Analysis Framework

elegansbot

Newtonian mechanics model for C. elegans locomotion

batmods-lite

Python library with ready-to-run battery models (SPM, P2D) and material properties (NMC, LFP, graphite)

sckinetics

Biological prior guided RNA kinetics inference

rnakinetics

Biological prior guided RNA kinetics inference

kineticheck

Explicit transport-limitation screening for heterogeneous catalytic kinetics

reactorch

A Differentiable Reacting Flow Simulation Package in PyTorch

kda

Python package used for the analysis of biochemical kinetic diagrams.

mm-evalkit

Evaluating musclemimic policies from physiological axes

rnadynamics

Biological prior guided RNA kinetics inference

scdynamics

Biological prior guided RNA kinetics inference